STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
broxBRO1 domain and CAAX motif containing. (410 aa)    
Predicted Functional Partners:
ENSCVAP00000007731
Uncharacterized protein.
    
 0.829
chmp5
Charged multivesicular body protein 5b.
    
 0.829
LOC107086476
Charged multivesicular body protein 4C.
   
 0.692
LOC107093444
Uncharacterized protein.
   
 0.692
LOC107086700
Charged multivesicular body protein 4Bb.
   
 0.692
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.653
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.598
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.566
chmp6
Charged multivesicular body protein 6.
    
 0.558
LOC107102142
Charged multivesicular body protein 6a.
    
 0.558
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.