STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN2Calpain 2, (m/II) large subunit, like; Belongs to the peptidase C2 family. (701 aa)    
Predicted Functional Partners:
LOC107102749
Talin 1.
    
 0.904
TLN2
Talin 2a.
    
 0.904
tln2
Talin 2b.
    
 0.904
LOC107081311
Uncharacterized protein.
   
 
 0.903
BAX
BCL2 associated X, apoptosis regulator.
     
 0.901
LOC107092282
Uncharacterized protein.
   
0.619
CAPNS1
Calpain small subunit 1.
   
0.619
ENSCVAP00000015409
Uncharacterized protein.
   
 0.550
ENSCVAP00000029978
Uncharacterized protein.
   
 0.550
LOC107104443
Intersectin 2b.
   
 
  0.523
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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