STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000005630Ion_trans domain-containing protein. (291 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.991
cacna1s
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
 
  
 
0.895
wdr35
WD repeat-containing protein 35.
    
 0.695
wdr19
WD repeat domain 19.
    
 0.676
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.675
Cacna1i
Ion_trans domain-containing protein.
  
0.642
LOC107092231
Calcium channel, voltage-dependent, beta 4b subunit.
   
 0.641
ENSCVAP00000022397
Calcium channel, voltage-dependent, beta 3b.
   
 0.641
cacnb2
Calcium channel, voltage-dependent, beta 2a.
   
 0.641
cacnb1
Calcium channel, voltage-dependent, beta 1 subunit.
   
 0.641
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.