STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000005658Uncharacterized protein; Belongs to the glycosyl hydrolase 1 family. (304 aa)    
Predicted Functional Partners:
fgf23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 0.833
LOC107101770
Uncharacterized protein; Belongs to the heparin-binding growth factors family.
    
 0.685
LOC107087110
Fibroblast growth factor receptor.
    
 0.582
ENSCVAP00000014703
Fibroblast growth factor receptor 2.
    
 0.582
LOC107090685
Fibroblast growth factor receptor 4.
    
 0.582
LOC107081801
Fibroblast growth factor receptor.
    
 0.582
fgfr2
Fibroblast growth factor receptor 2.
    
 0.582
rps27a
Ribosomal protein S27a.
    
 0.552
fgf3
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.520
LOC107096942
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.516
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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