STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgdHomogentisate 1,2-dioxygenase. (443 aa)    
Predicted Functional Partners:
LOC107092762
4-hydroxyphenylpyruvate dioxygenase.
  
 0.996
LOC107090343
4-hydroxyphenylpyruvate dioxygenase.
  
 0.996
gstz1
Glutathione S-transferase zeta 1; Belongs to the GST superfamily.
 
 
 0.991
hpdl
4-hydroxyphenylpyruvate dioxygenase.
  
 0.973
fah
Fumarylacetoacetase.
  
 
 0.911
ENSCVAP00000024268
Uncharacterized protein.
   
  
 0.852
LOC107094523
Fumarylacetoacetate hydrolase domain containing 2A.
  
 
 0.846
Fahd1
Fumarylacetoacetate hydrolase domain containing 1.
  
 
 0.846
agxt2
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  
 0.795
LOC107092608
Glutathione S-transferase rho; Belongs to the GST superfamily.
  
 
 0.791
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.