STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000005698Chemokine (C-C motif) receptor 6b. (352 aa)    
Predicted Functional Partners:
LOC107092313
C-C motif chemokine.
    
  0.905
LOC107092314
C-C motif chemokine.
    
  0.905
ENSCVAP00000017529
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
  
 
0.903
LOC107094808
SCY domain-containing protein.
     
  0.900
LOC107089595
C-C motif chemokine receptor 6; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.900
LOC107100766
Sphingosine-1-phosphate receptor 4; Belongs to the G-protein coupled receptor 1 family.
  
   
 0.450
LOC107096538
C-C motif chemokine.
   
 0.409
ENSCVAP00000017608
SCY domain-containing protein.
   
 0.408
ENSCVAP00000013874
C-C motif chemokine.
   
 0.400
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.