STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabp3Fatty acid binding protein 3, muscle and heart; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (178 aa)    
Predicted Functional Partners:
LOC107087831
Fatty acid binding protein 11a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
  
  
 
0.905
cd36
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
   
 
 0.605
LOC107091681
Fatty acid binding protein 6, ileal (gastrotropin).
   
 
 0.536
ppard
Peroxisome proliferator-activated receptor delta b.
    
 0.482
dhcr7
7-dehydrocholesterol reductase.
      
 0.456
Lipe
Lipase, hormone-sensitive b.
   
 0.429
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
      
 0.426
LOC107090374
3-hydroxy-3-methylglutaryl coenzyme A reductase.
     
 0.423
hmgcl
3-hydroxy-3-methylglutaryl-CoA lyase.
    
 
 0.412
elovl5
Elongation of very long chain fatty acids protein.
   
  
 0.409
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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