STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ano6Anoctamin. (922 aa)    
Predicted Functional Partners:
panx1
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.666
LOC107091632
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.666
LOC107089084
Calcium homeostasis modulator 1.
      
 0.665
LOC107103833
XK-related protein.
      
 0.418
edil3
EGF-like repeats and discoidin I-like domains 3a.
     
 0.414
LOC107100731
Inositol 1,4,5-trisphosphate receptor interacting protein.
      
 0.412
WDR1
WD repeat domain 1.
      
 0.408
smpdl3b
Sphingomyelin phosphodiesterase, acid-like 3B.
      
 0.408
cacybp
Calcyclin binding protein.
      
 0.407
mogs
Mannosyl-oligosaccharide glucosidase.
      
 0.403
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.