STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107100826Uncharacterized protein. (795 aa)    
Predicted Functional Partners:
LOC107083123
Suppressor of cytokine signaling 3a.
   
 0.760
socs3
Suppressor of cytokine signaling 3.
   
 0.760
spi1
Spi-1 proto-oncogene b.
   
 0.716
jak1
Tyrosine-protein kinase.
   
 0.698
jak3
Tyrosine-protein kinase.
   
 0.667
tyk2
Tyrosine-protein kinase.
   
 0.663
LOC107085172
Tyrosine-protein kinase.
   
 0.663
jak2
Tyrosine-protein kinase.
   
 0.663
ebi3
Epstein-Barr virus induced 3.
   
 0.649
grb2
Growth factor receptor-bound protein 2b.
   
  0.637
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.