STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107093156Nuclear receptor binding protein 1. (532 aa)    
Predicted Functional Partners:
LOC107082623
Uncharacterized protein.
    
 
 0.596
ENSCVAP00000030917
Uncharacterized protein.
    
 
 0.596
foxo4
Forkhead box O4.
      
 0.550
gpr6
G protein-coupled receptor 6; Belongs to the G-protein coupled receptor 1 family.
      
 0.549
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 
 0.512
LOC107105173
Uncharacterized protein.
    
 
 0.472
LOC107090995
TSC22 domain family member 3.
    
 
 0.472
tsc22d1
Uncharacterized protein.
    
 
 0.472
LOC107083573
TSC22 domain family member 1.
    
 
 0.472
ELOB
Elongin B.
    
 
 0.465
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (12%) [HD]