STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
naa38N(alpha)-acetyltransferase 38, NatC auxiliary subunit. (109 aa)    
Predicted Functional Partners:
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
    
 0.994
naa30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
    
 0.984
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.961
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.960
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.958
snrpg
Small nuclear ribonucleoprotein G.
   
 0.952
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 0.942
lsm10
LSM10, U7 small nuclear RNA associated.
   
 0.931
sf3b4
Splicing factor 3b, subunit 4.
    
 0.931
ddx46
DEAD (Asp-Glu-Ala-Asp) box polypeptide 46.
    
 0.929
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.