STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sptbn1Spectrin beta, non-erythrocytic 1. (1991 aa)    
Predicted Functional Partners:
ENSCVAP00000005849
Si:zfos-1837d3.1.
 
     0.897
ENSCVAP00000027104
PH domain-containing protein.
 
     0.852
ENSCVAP00000006030
Uncharacterized protein.
 
 
 0.789
ENSCVAP00000006056
Uncharacterized protein.
   
0.706
Sptan1
Uncharacterized protein.
   
0.706
ENSCVAP00000006043
Uncharacterized protein.
   
 0.646
LOC107104443
Intersectin 2b.
     
 0.622
ENSCVAP00000031587
Uncharacterized protein.
     
 0.622
ENSCVAP00000031602
Uncharacterized protein.
     
 0.622
LOC107092921
Uncharacterized protein.
   
 0.449
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.