STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000005986Noggin; Belongs to the noggin family. (224 aa)    
Predicted Functional Partners:
bmp4
Bone morphogenetic protein 4.
    
 0.927
LOC107096868
Bone morphogenetic protein 16.
    
 0.919
bmp2
Bone morphogenetic protein 2b.
    
 0.919
LOC107102021
Bone morphogenetic protein 7a.
    
 0.914
LOC107084983
Noggin; Belongs to the noggin family.
  
  
 
0.904
nog
Noggin; Belongs to the noggin family.
  
  
 
0.903
bmp7
Bone morphogenetic protein 7b.
    
 0.876
LOC107098545
Bone morphogenetic protein 6.
    
 0.875
bmp5
Bone morphogenetic protein 5.
    
 0.875
gdf5
Growth differentiation factor 5.
    
 0.812
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.