STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1aProtein phosphatase, Mg2+/Mn2+ dependent, 1Aa. (386 aa)    
Predicted Functional Partners:
map2k4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.919
LOC107096251
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
   
 
 0.919
MAP2K6
Mitogen-activated protein kinase kinase 6.
    
 0.913
LOC107090247
Mitogen-activated protein kinase kinase 6.
    
 0.913
LOC107094175
Protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative).
  
  
 
0.902
LOC107087880
Protein phosphatase, Mg2+/Mn2+ dependent, 1Nb (putative).
  
  
 
0.902
arih1
RBR-type E3 ubiquitin transferase.
   
 
 0.538
prkaa2
Non-specific serine/threonine protein kinase.
   
 0.520
prkaa1
Non-specific serine/threonine protein kinase.
   
 0.520
LOC107088009
Ubiquitin-conjugating enzyme E2L 3b; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.492
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.