STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sptan1Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
ENSCVAP00000010979
Uncharacterized protein.
 
 
0.947
LOC107090480
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
 0.946
ENSCVAP00000006030
Uncharacterized protein.
 
     0.921
ENSCVAP00000027104
PH domain-containing protein.
   
 0.749
LOC107087815
PH domain-containing protein.
   
 0.706
ENSCVAP00000005849
Si:zfos-1837d3.1.
   
 0.706
sptbn1
Spectrin beta, non-erythrocytic 1.
   
0.706
LOC107093747
Spectrin beta chain; Belongs to the spectrin family.
   
0.706
ENSCVAP00000022207
Uncharacterized protein.
   
 0.706
ENSCVAP00000022212
Uncharacterized protein.
   
 0.706
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.