STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mllt10MLLT10 histone lysine methyltransferase DOT1L cofactor. (1056 aa)    
Predicted Functional Partners:
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 
 0.852
trip12
Thyroid hormone receptor interactor 12.
      
 0.571
yeats4
YEATS domain containing 4.
    
 
 0.523
ENSCVAP00000008574
AHD domain-containing protein.
    
 
 0.479
mllt1
MLLT1 super elongation complex subunit a.
    
 
 0.479
LOC107083520
Afadin, adherens junction formation factor a.
      
 0.468
aff1
Uncharacterized protein.
    
 
 0.425
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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