STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107099053Zgc:153901. (326 aa)    
Predicted Functional Partners:
gart
Phosphoribosylglycinamide formyltransferase.
    
 0.959
mthfd2l
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
    
 0.788
mthfd2
Uncharacterized protein.
    
 0.788
mthfsd
Methenyltetrahydrofolate synthetase domain containing.
    
 0.760
mthfs
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
    
 0.760
hal
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
  
 0.707
mthfd1
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b.
    
 0.706
ENSCVAP00000020219
Uncharacterized protein.
    
 0.706
mthfd1l
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like.
    
 0.706
agxt
Serine--pyruvate aminotransferase.
  
  
 0.609
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.