STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107094437Striatin, calmodulin binding protein. (780 aa)    
Predicted Functional Partners:
strip1
Striatin interacting protein 1.
    
 
 0.758
strip2
Striatin interacting protein 2.
    
 
 0.744
ppp2r1b
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.738
LOC107095707
MOB family member 4, phocein.
   
 
 0.724
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.709
ccm2
CCM2 scaffold protein.
     
 0.670
ush1c
Usher syndrome 1C.
      
 0.664
pdcd10
Programmed cell death 10b.
    
 
 0.662
LOC107094837
CTTNBP2 N-terminal like b.
   
 
 0.644
LOC107103357
CTTNBP2 N-terminal like a.
   
 
 0.644
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.