STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dbpD site albumin promoter binding protein b. (370 aa)    
Predicted Functional Partners:
bhlhe41
Basic helix-loop-helix family, member e41.
   
 0.714
nr1d1
Nuclear receptor subfamily 1, group d, member 1.
   
 
 0.711
COX2
Cytochrome c oxidase subunit 2; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1.
    
 0.676
LOC107084042
Circadian associated repressor of transcription a.
   
  
 0.670
LOC107084541
Cytochrome c oxidase subunit 7C.
   
 0.617
LOC107097411
Cytochrome c oxidase subunit 5Ab.
   
 0.611
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.611
LOC107097799
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.567
ENSCVAP00000026389
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 0.567
LOC107102475
Cytochrome c oxidase subunit 4I2.
   
 0.550
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.