STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000006242A kinase (PRKA) anchor protein 9. (1550 aa)    
Predicted Functional Partners:
ENSCVAP00000024038
Uncharacterized protein.
 
      0.899
nktr
Natural killer cell triggering receptor.
   
 
 0.677
ENSCVAP00000003289
Ion_trans domain-containing protein; Belongs to the potassium channel family.
    
 0.631
kcnq1
Potassium voltage-gated channel, KQT-like subfamily, member 1.1; Belongs to the potassium channel family.
    
 0.631
cetn2
Centrin, EF-hand protein, 2.
    
 0.620
tubg1
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.606
plk3
Serine/threonine-protein kinase PLK.
   
 0.593
ift88
Intraflagellar transport 88 homolog.
   
 0.593
plk2
Serine/threonine-protein kinase PLK.
   
 0.593
PLK1
Serine/threonine-protein kinase PLK.
   
 0.593
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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