STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mul1Mitochondrial E3 ubiquitin protein ligase 1b. (352 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
  0.956
usp30
Ubiquitin carboxyl-terminal hydrolase.
     
 0.757
tmem115
Transmembrane protein 115.
   
    0.718
Park2
RBR-type E3 ubiquitin transferase.
    
 
 0.679
ENSCVAP00000007456
Uncharacterized protein.
    
 
 0.679
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
     
 0.609
tomm20
Translocase of outer mitochondrial membrane 20b.
     
 0.608
vdac1
Voltage-dependent anion channel 1.
     
 0.560
LOC107083810
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.556
UBE2D1
Ubiquitin-conjugating enzyme E2D 1a; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.556
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.