STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cntnap2Contactin associated protein like 2a. (103 aa)    
Predicted Functional Partners:
ENSCVAP00000002324
F5/8 type C domain-containing protein.
 
      0.540
LOC107087192
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
  
 0.500
LOC107098226
Neuroligin 3b.
    
 
 0.493
nlgn3
Neuroligin 3a.
    
 
 0.493
ENSCVAP00000020470
Neuroligin 4 X-linked a.
    
 
 0.493
LOC107082579
Neuroligin 2b.
    
 
 0.493
ENSCVAP00000024949
Neuroligin 1.
    
 
 0.493
nlgn2
COesterase domain-containing protein.
    
 
 0.493
LOC107091889
COesterase domain-containing protein.
    
 
 0.493
ENSCVAP00000003353
Melanocortin 4 receptor.
   
  
 0.427
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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