STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilf3Interleukin enhancer binding factor 3b. (694 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer binding factor 2.
   
 
0.981
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.854
LOC107100983
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.812
LOC107103912
RRM domain-containing protein.
   
 
 0.751
LOC107102835
RRM domain-containing protein.
   
 
 0.751
xpo5
Exportin 5.
    
 
 0.678
LOC107103138
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.660
ppp1r12a
Protein phosphatase 1 regulatory subunit.
    
 
 0.655
ENSCVAP00000023138
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.647
ENSCVAP00000032378
Uncharacterized protein.
   
 
 0.647
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.