STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rapsnReceptor-associated protein of the synapse, 43kD. (400 aa)    
Predicted Functional Partners:
MUSK
Muscle associated receptor tyrosine kinase.
   
  
 0.674
LOC107095624
Uncharacterized protein.
      
 0.665
neurl1b
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.665
neurl1
Neuralized E3 ubiquitin protein ligase 1Aa.
      
 0.665
agrn
Agrin.
      
 0.664
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
 
 0.620
chrnd
Cholinergic receptor, nicotinic, delta (muscle).
   
 
 0.550
LOC107099786
Cholinergic receptor, nicotinic, epsilon.
   
 
 0.538
LOC107093766
Docking protein 7.
      
 0.516
DOK7
Docking protein 7.
      
 0.516
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.