Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
flcnFolliculin. (556 aa)    
Predicted Functional Partners:
fnip1
Folliculin interacting protein 1.
    
 0.999
LOC107087875
Ras-related GTP binding A.
    
 0.996
LOC107094261
Uncharacterized protein.
    
 0.990
rragc
Ras-related GTP binding Ca.
    
 0.990
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.912
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.910
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.879
lamtor3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
    
 0.867
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
    
 
 0.857
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.774
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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