STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107086875Si:dkey-1h24.2; Belongs to the G-protein coupled receptor 1 family. (451 aa)    
Predicted Functional Partners:
cck
Gastrin domain-containing protein.
   
 0.814
LOC107086764
Gastrin domain-containing protein.
   
 0.814
LOC107100829
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.633
LOC107099626
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.633
LOC107097117
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.633
LOC107097118
Uncharacterized protein.
    
 0.633
nts
Neurotensin.
    
 0.594
gabbr2
Gamma-aminobutyric acid (GABA) B receptor, 2.
   
 
 0.576
CHRNA6
Cholinergic receptor nicotinic alpha 6 subunit.
      
 0.571
gabrb2
Gamma-aminobutyric acid type A receptor beta2 subunit a; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
  
 0.555
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.