STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
farsaPhenylalanyl-tRNA synthetase subunit alpha. (497 aa)    
Predicted Functional Partners:
farsb
Phenylalanyl-tRNA synthetase subunit beta.
  
 0.999
ENSCVAP00000011270
Uncharacterized protein.
  
 0.991
fars2
Phenylalanyl-tRNA synthetase 2, mitochondrial.
   
 
 0.948
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
  
 0.914
yars1
Tyrosine--tRNA ligase.
  
  
 0.884
vars2
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.863
qars1
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.777
kars1
Lysine--tRNA ligase.
  
  
 0.760
mars1
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.758
hars1
Histidyl-tRNA synthetase.
  
  
 0.751
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.