STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcgf2Polycomb group ring finger 2. (331 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
   
0.920
rnf2
Ring finger protein 2.
   
0.920
LOC107092814
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.861
LOC107085518
Chromobox homolog 8b.
    
 0.861
cbx6
Chromobox homolog 6a.
    
 0.840
LOC107092841
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.834
cbx4
Chromobox 4.
    
 0.834
SCMH1
Scm polycomb group protein homolog 1.
    
 0.799
LOC107102158
Scm polycomb group protein like 2.
    
 0.799
scml2
SAM domain-containing protein.
    
 0.799
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.