STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107083771Uncharacterized protein; Belongs to the heat shock protein 70 family. (647 aa)    
Predicted Functional Partners:
LOC107102050
Mitogen-activated protein kinase.
   
 
 0.905
mapk8
Mitogen-activated protein kinase.
   
 
 0.903
LOC107101533
Mitogen-activated protein kinase.
   
 
 0.903
mapk10
Mitogen-activated protein kinase.
   
 
 0.903
stip1
Stress-induced phosphoprotein 1.
  
 0.877
dnaja2
DnaJ heat shock protein family (Hsp40) member A2.
 
 0.861
LOC107100300
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
   
 0.860
gak
Cyclin G associated kinase.
    
 0.852
LOC107090560
DnaJ heat shock protein family (Hsp40) member A2b.
 
 0.847
DNAJA4
DnaJ heat shock protein family (Hsp40) member A4.
 
 0.844
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.