STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCTEX1D1Tctex1 domain containing 1. (171 aa)    
Predicted Functional Partners:
DYNLT3
Dynein, light chain, Tctex-type 3.
  
 
 
 0.803
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
   
 0.791
ENSCVAP00000013298
Robl_LC7 domain-containing protein.
  
 0.780
dynlrb1
Dynein light chain roadblock-type 1.
  
 0.780
dynlt1
Dynein, light chain, Tctex-type 1.
  
 
 
 0.779
wdr60
WD repeat domain 60.
    
 0.774
dynlrb2
Robl_LC7 domain-containing protein.
  
 0.766
dnal4
Dynein light chain.
    
 0.753
ENSCVAP00000015167
WD repeat domain 78.
    
 0.725
LOC107089651
Dynein light chain.
    
 0.708
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.