STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000006431GAS domain-containing protein. (417 aa)    
Predicted Functional Partners:
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.614
dnali1
Dynein, axonemal, light intermediate chain 1.
  
 
 
 0.614
DNALI1
Dynein axonemal light intermediate chain 1.
  
 
 
 0.608
dnai2
Dynein, axonemal, intermediate chain 2b.
  
   
 0.603
coasy
CoA synthase.
    
 
 0.599
LOC107090733
Uncharacterized protein.
  
 
 
 0.564
rsph3
Radial spoke head 3.
  
 
 
 0.526
spag6
Sperm associated antigen 6.
  
   
 0.503
mns1
Meiosis-specific nuclear structural 1.
  
 
 0.486
RSPH1
Radial spoke head component 1.
    
 
 0.473
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.