STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000006440COesterase domain-containing protein. (202 aa)    
Predicted Functional Partners:
ENSCVAP00000024949
Neuroligin 1.
 
     0.604
LOC107087074
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
  
 
 0.579
wdr43
WD repeat domain 43.
   
 0.537
utp20
UTP20 small subunit processome component.
   
 0.534
LOC107084856
Uncharacterized protein.
   
 0.531
MDGA2
MAM domain containing glycosylphosphatidylinositol anchor 2.
   
 0.531
mdga1
MAM domain containing glycosylphosphatidylinositol anchor 1.
   
 0.531
ENSCVAP00000001965
Protein kinase domain-containing protein.
   
 0.519
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.519
ENSCVAP00000021138
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.519
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.