STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccr7Chemokine (C-C motif) receptor 7; Belongs to the G-protein coupled receptor 1 family. (374 aa)    
Predicted Functional Partners:
LOC107101844
Chemokine (C-C motif) receptor 10; Belongs to the G-protein coupled receptor 1 family.
     
0.937
LOC107083983
SCY domain-containing protein.
     
  0.900
LOC107087944
C-C motif chemokine.
   
 0.728
LOC107091676
Tyrosine-protein kinase.
   
 
 0.683
lck
Tyrosine-protein kinase.
   
 
 0.679
ARHGEF2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
     
 0.678
rac2
Uncharacterized protein.
    
 0.673
znf148
Zinc finger protein 148.
   
  
 0.673
LOC107091309
Akirin 2.
      
 0.671
LOC107105158
Akirin 2.
      
 0.671
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.