STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MX1MX dynamin like GTPase 1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (621 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 0.985
ENSCVAP00000017002
USP domain-containing protein.
   
 0.855
rsad2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.833
LOC107104443
Intersectin 2b.
    
 
 0.748
ENSCVAP00000031587
Uncharacterized protein.
    
 
 0.748
ENSCVAP00000031602
Uncharacterized protein.
    
 
 0.748
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 0.711
LOC107087805
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.646
ENSCVAP00000012072
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.646
LOC107096530
Eukaryotic translation initiation factor 2-alpha kinase 2.
   
 0.646
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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