STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000006541Uncharacterized protein. (189 aa)    
Predicted Functional Partners:
Ryr2
Ion_trans domain-containing protein.
 
     0.939
ENSCVAP00000025068
Uncharacterized protein.
 
     0.786
fkbp1b
Peptidylprolyl isomerase.
    
 0.774
LOC107082738
Peptidylprolyl isomerase.
    
 0.695
LOC107102792
Corin, serine peptidase.
      
 0.672
ENSCVAP00000022956
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
      
 0.671
ENSCVAP00000024219
Uncharacterized protein.
 
     0.660
fkbp3
Peptidylprolyl isomerase.
    
 0.640
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
      
 0.631
ENSCVAP00000011930
Peptidylprolyl isomerase.
    
 0.603
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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