STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc10a7Sodium/bile acid cotransporter; Does not show transport activity towards bile acids or steroid sulfates; Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family. (341 aa)    
Predicted Functional Partners:
LOC107100354
Cytochrome P450, family 7, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family.
      
 0.660
Slc10a3
Solute carrier family 10 member 3.
      
 0.660
tmem165
GDT1 family protein.
      
 0.640
acot8
Acyl-CoA thioesterase 8.
      
 0.629
hsd17b4
Hydroxysteroid (17-beta) dehydrogenase 4.
     
 0.494
ch25h
Cholesterol 25-hydroxylase; Belongs to the sterol desaturase family.
      
 0.489
gpbar1
G protein-coupled bile acid receptor 1.
      
 0.485
slc10a4
Solute carrier family 10 member 4.
      
 0.482
TGDS
TDP-glucose 4,6-dehydratase.
   
  
 0.426
impad1
Inositol monophosphatase domain containing 1.
      
 0.414
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.