STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107088781Zgc:158689. (566 aa)    
Predicted Functional Partners:
rac2
Uncharacterized protein.
    
 0.936
LOC107092536
Rac family small GTPase 1b.
    
 0.936
LOC107087645
Rac family small GTPase 3b.
    
 0.936
wasf2
WASP family member 2.
    
 0.932
LOC107102146
BAI1-associated protein 2a.
    
 
0.930
BAIAP2
BAI1 associated protein 2.
    
 
0.930
actb
Uncharacterized protein.
    
  0.919
LOC107097985
Zgc:109889.
    
 0.865
wasf1
WASP family member 1.
    
 0.865
wasf3
WASP family member 3b.
    
 0.865
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.