STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b3galt6Hexosyltransferase. (310 aa)    
Predicted Functional Partners:
b4galt7
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
    
 
 0.675
LOC107102834
Uncharacterized protein.
     
 0.631
uxs1
UDP-glucuronate decarboxylase 1.
      
 0.597
LOC107105123
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.585
dse
Dermatan sulfate epimerase.
      
 0.577
b3gat3
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
   
  
 0.552
xylt2
Xylosyltransferase II.
    
 
 0.492
dcn
Decorin; May affect the rate of fibrils formation.
     
 0.489
ENSCVAP00000029384
Decorin; May affect the rate of fibrils formation.
     
 0.489
gpc6
Glypican 6b; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
     
 0.483
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.