STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbcelTubulin folding cofactor E-like b. (432 aa)    
Predicted Functional Partners:
ENSCVAP00000001782
Collagen, type XI, alpha 1a.
      
 0.669
nid1
Nidogen 1a.
      
 0.669
nid2
Nidogen 2a (osteonidogen).
      
 0.669
tiprl
TIP41, TOR signaling pathway regulator-like (S. cerevisiae).
      
 0.669
tbcb
Tubulin folding cofactor B.
      
 0.545
tbcc
Tubulin folding cofactor C.
      
 0.499
tbcd
Tubulin folding cofactor D.
      
 0.495
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
      
 0.480
mitd1
MIT, microtubule interacting and transport, domain containing 1.
      
 0.408
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.