STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ado2-aminoethanethiol (cysteamine) dioxygenase a. (256 aa)    
Predicted Functional Partners:
LOC107091399
Cysteine sulfinic acid decarboxylase.
     
 0.910
GADL1
Glutamate decarboxylase like 1.
     
 0.910
LOC107086843
Glutamate decarboxylase 1b.
     
 0.910
gad1
Glutamate decarboxylase 1a.
     
 0.910
gad2
Glutamate decarboxylase 2.
     
 0.907
cdo1
Cysteine dioxygenase.
      
 0.513
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.