STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000006795Uncharacterized protein. (334 aa)    
Predicted Functional Partners:
ENSCVAP00000018590
Uncharacterized protein.
 
   
  0.896
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.869
rbbp5
Retinoblastoma binding protein 5.
    
 0.865
Kmt2c
Uncharacterized protein.
 
   
  0.847
wdr5
WD repeat domain 5.
   
 0.764
cenpn
Centromere protein N.
   
 0.667
kdm6a
Lysine (K)-specific demethylase 6A, like.
   
 0.661
wsb1
WD repeat and SOCS box containing 1.
   
 0.656
wsb2
WD repeat and SOCS box containing 2.
   
 0.656
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.637
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.