STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107082592Zgc:66475. (544 aa)    
Predicted Functional Partners:
timeless
Timeless circadian clock.
    
 0.753
per1
Period circadian clock 1b.
   
 0.735
LOC107090434
Cryptochrome circadian regulator 2.
      
 0.631
per2
PAS domain-containing protein.
   
 0.625
LOC107083335
Period circadian clock 2.
   
 0.625
LOC107083329
Period circadian clock 3.
   
 0.623
LOC107104192
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.611
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.611
LOC107098020
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.588
ddb2
Damage-specific DNA binding protein 2.
   
  
 0.509
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.