STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo7F-box protein 7. (469 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.833
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.713
rnf7
Ring finger protein 7.
    
 0.713
mrpl2
Mitochondrial ribosomal protein L2.
    
 0.685
chchd2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
    
 
 0.676
pla2g6
Phospholipase A2, group VI (cytosolic, calcium-independent).
      
 0.671
atxn2
Ataxin 2.
    
 
 0.671
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.662
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
    
 
 0.633
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.594
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.