STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107086015Uncharacterized protein. (637 aa)    
Predicted Functional Partners:
unc5a
Unc-5 netrin receptor A.
     
 0.724
neo1
Neogenin 1b.
   
 0.704
ENSCVAP00000029632
DCC netrin 1 receptor.
   
 0.628
Igdcc4
Uncharacterized protein.
   
 0.587
LOC107084435
Unc-5 netrin receptor C.
     
 0.569
unc5c
Unc-5 netrin receptor C.
     
 0.569
unc5d
Unc-5 netrin receptor Da.
     
 0.560
LOC107094643
Sphingosine-1-phosphate receptor 5a; Belongs to the G-protein coupled receptor 1 family.
     
 0.525
LOC107100430
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.525
s1pr1
Sphingosine-1-phosphate receptor 1; Belongs to the G-protein coupled receptor 1 family.
     
 0.496
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.