STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prpsap2Phosphoribosyl pyrophosphate synthetase-associated protein 2. (357 aa)    
Predicted Functional Partners:
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.782
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.782
gart
Phosphoribosylglycinamide formyltransferase.
  
  
 0.734
LOC107081479
Uncharacterized protein.
  
0.726
Prps2
Pribosyltran_N domain-containing protein.
  
0.718
LOC107089056
Phosphoribosyl pyrophosphate synthetase 1B.
  
0.712
eprs1
Glutamyl-prolyl-tRNA synthetase.
  
 
 0.684
LOC107098164
PPC domain-containing protein.
  
  
 0.637
kars1
Lysine--tRNA ligase.
   
 
 0.623
ivns1abp
Influenza virus NS1A binding protein a.
    
 
 0.602
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.