STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107085443Chemokine (C-C motif) receptor 9b; Belongs to the G-protein coupled receptor 1 family. (363 aa)    
Predicted Functional Partners:
LOC107087944
C-C motif chemokine.
   
 0.977
LOC107085925
Chemokine (C-C motif) ligand 25a.
     
 0.921
LOC107104786
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.901
cxcl12
Chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1).
    
 0.583
LOC107083437
Chemokine (C-X-C motif) ligand 12b (stromal cell-derived factor 1); Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.583
ENSCVAP00000032457
Chemokine (C-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
  
  
0.548
LOC107096538
C-C motif chemokine.
   
 0.538
LOC107101582
Si:cabz01093077.1; Belongs to the G-protein coupled receptor 1 family.
   
 
0.522
LOC107101581
Chemokine (C-C motif) receptor 8.1; Belongs to the G-protein coupled receptor 1 family.
   
 
0.517
LOC107095718
SCY domain-containing protein.
    
 0.513
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.