STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc1a2Amino acid transporter. (537 aa)    
Predicted Functional Partners:
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.701
LOC107103489
Solute carrier family 32 member 1.
   
 
 0.685
gng3
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
  
 0.677
ENSCVAP00000000837
Stathmin; Belongs to the stathmin family.
   
 
 0.676
stmn4
Stathmin; Belongs to the stathmin family.
   
 
 0.676
slc7a7
Solute carrier family 7 member 7.
   
  
 0.673
gnb2
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
   
  
 0.660
ENSCVAP00000000394
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.598
slc7a5
Solute carrier family 7 member 5.
   
  
 0.489
SNTA1
Syntrophin alpha 1.
      
 0.481
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.