STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgef7Rho guanine nucleotide exchange factor (GEF) 7b. (788 aa)    
Predicted Functional Partners:
PAK3
Non-specific serine/threonine protein kinase.
    
 0.796
pak1
Non-specific serine/threonine protein kinase.
    
 0.796
git2
G protein-coupled receptor kinase interacting ArfGAP 2a.
    
 0.790
git1
G protein-coupled receptor kinase interacting ArfGAP 1.
    
 0.790
LOC107091298
G protein-coupled receptor kinase interacting ArfGAP 2b.
    
 0.790
pak2
Non-specific serine/threonine protein kinase.
    
 0.786
PAK2
Non-specific serine/threonine protein kinase.
    
 0.786
rab2a
RAB2A, member RAS oncogene family.
    
 0.736
CDC42
Cell division cycle 42.
   
 0.710
LOC107085118
Uncharacterized protein.
   
 0.710
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.