selenos protein (Cyprinodon variegatus) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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Score

selenos

Selenoprotein S. (187 aa)

Predicted Functional Partners:

LOC107094393

0.952

vcp

0.952

derl1

0.897

LOC107103646

0.832

selenok

0.735

yif1a

0.698

yif1b

0.698

selenof

0.666

selenot

0.662

selenon

0.661

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107094393	LOC107103646	ENSCVAP00000007414	ENSCVAP00000009186	Zgc:136908; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.921
LOC107094393	derl1	ENSCVAP00000007414	ENSCVAP00000015480	Zgc:136908; Belongs to the AAA ATPase family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.966
LOC107094393	selenok	ENSCVAP00000007414	ENSCVAP00000020211	Zgc:136908; Belongs to the AAA ATPase family.	Selenoprotein K.	0.495
LOC107094393	selenos	ENSCVAP00000007414	ENSCVAP00000007055	Zgc:136908; Belongs to the AAA ATPase family.	Selenoprotein S.	0.952
LOC107094393	vcp	ENSCVAP00000007414	ENSCVAP00000009874	Zgc:136908; Belongs to the AAA ATPase family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.900
LOC107103646	LOC107094393	ENSCVAP00000009186	ENSCVAP00000007414	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Zgc:136908; Belongs to the AAA ATPase family.	0.921
LOC107103646	derl1	ENSCVAP00000009186	ENSCVAP00000015480	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.997
LOC107103646	selenok	ENSCVAP00000009186	ENSCVAP00000020211	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Selenoprotein K.	0.449
LOC107103646	selenos	ENSCVAP00000009186	ENSCVAP00000007055	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Selenoprotein S.	0.832
LOC107103646	vcp	ENSCVAP00000009186	ENSCVAP00000009874	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.921
derl1	LOC107094393	ENSCVAP00000015480	ENSCVAP00000007414	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Zgc:136908; Belongs to the AAA ATPase family.	0.966
derl1	LOC107103646	ENSCVAP00000015480	ENSCVAP00000009186	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.997
derl1	selenos	ENSCVAP00000015480	ENSCVAP00000007055	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Selenoprotein S.	0.897
derl1	vcp	ENSCVAP00000015480	ENSCVAP00000009874	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	Valosin containing protein; Belongs to the AAA ATPase family.	0.966
selenof	selenok	ENSCVAP00000024290	ENSCVAP00000020211	Selenoprotein F.	Selenoprotein K.	0.663
selenof	selenon	ENSCVAP00000024290	ENSCVAP00000017614	Selenoprotein F.	Selenoprotein N.	0.641
selenof	selenos	ENSCVAP00000024290	ENSCVAP00000007055	Selenoprotein F.	Selenoprotein S.	0.666
selenof	selenot	ENSCVAP00000024290	ENSCVAP00000024850	Selenoprotein F.	Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.	0.686
selenok	LOC107094393	ENSCVAP00000020211	ENSCVAP00000007414	Selenoprotein K.	Zgc:136908; Belongs to the AAA ATPase family.	0.495
selenok	LOC107103646	ENSCVAP00000020211	ENSCVAP00000009186	Selenoprotein K.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.449