STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107083758Zgc:110366. (320 aa)    
Predicted Functional Partners:
mtr
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 0.716
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
     
 0.702
gclc
Glutamate-cysteine ligase, catalytic subunit.
   
 0.688
mmadhc
Zgc:92335.
    
 0.659
ENSCVAP00000028128
Uncharacterized protein.
    
 0.659
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
  
 0.448
LOC107087536
Potassium voltage-gated channel, shaker-related subfamily, beta member 2 b.
  
 0.448
LOC107086658
Aldo_ket_red domain-containing protein.
  
0.448
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
  
 0.448
akr7a2
Aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase).
  
0.448
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.